typo fix for all rule, fixed f-string handling in dorado model folder helper

2026-09-17 22:26:44 +01:00
parent 08467102c8
commit 1511281885
2 changed files with 3 additions and 2 deletions
@@ -25,7 +25,7 @@ rule all:
        #'../data/raw_pod5/'
        #'../data/pod5_files_to_pull',
        #'../data/basecalled_reads/hac.fastq.gz'
-        expand('../data/raw_pod5/PBK98658_853a956f_57f83f46_{batch}.fastq.gz',batch=range(1,config["pod5_dataset_size"]+1,config["pod5_stride"]))
+        expand('../data/raw_pod5/PBK98658_853a956f_57f83f46_{batch}.pod5',batch=range(1,config["pod5_dataset_size"]+1,config["pod5_stride"]))

 use rule * from preparation
 use rule * from baseline