From c734715d3c2186b7d02153b86d36026a0009713b Mon Sep 17 00:00:00 2001 From: Tom Kasper Date: Sun, 4 Oct 2026 10:41:13 +0100 Subject: [PATCH] Re-added trap bascell --- workflow/Snakefile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/workflow/Snakefile b/workflow/Snakefile index 01747bd..50625da 100644 --- a/workflow/Snakefile +++ b/workflow/Snakefile @@ -30,7 +30,7 @@ rule all: #'../data/basecalled_reads/hac.fastq.gz' #expand('../data/raw_pod5/PBK98658_853a956f_57f83f46_{batch}.pod5',batch=range(1,config["pod5_dataset_size"]+1,config["pod5_stride"])) '../data/aligned_reads/nomiss_hac_to_genome.sorted.bam', - #'../data/aligned_reads/trap_hac_to_genome.sorted.bam' + '../data/aligned_reads/trap_hac_to_genome.sorted.bam' #'../data/ml_inputs/hac_label_store.pq' #'../data/ml_inputs/model_layouts/cnn_512_4_100000_11_4.json'