Commit Graph

Select branches

Hide Pull Requests

main

Mono Color

• 5e95ea9476 Changed trap download structure main Tom Kasper 2026-10-06 19:14:53 +01:00
• c734715d3c Re-added trap bascell Tom Kasper 2026-10-04 10:41:13 +01:00
• 673005ceba added rocm path Tom Kasper 2026-10-04 10:37:29 +01:00
• 58974c6af1 Removed trap dataset read limit Tom Kasper 2026-10-04 09:58:00 +01:00
• 10b0a29d2b Corrected trap dataset handling Tom Kasper 2026-10-04 09:55:42 +01:00
• f688e173e7 Ensured trap donwload runs solo Tom Kasper 2026-10-03 15:52:31 +01:00
• 097ecab270 updated curl sybtax for trap data Tom Kasper 2026-10-03 15:51:47 +01:00
• 0fdb5fa07b added limit for number of trap reads to process Tom Kasper 2026-10-03 15:35:38 +01:00
• 88406e584e Updated config and resource requirements Tom Kasper 2026-10-03 15:25:09 +01:00
• 97d9ddb2c5 Updated custom models to current commit Tom Kasper 2026-10-03 15:17:38 +01:00
• f0cd594148 Added custom models as submodule, added pipleline for trap species handling (up to alignment). Initial progress on custom model rules Tom Kasper 2026-10-03 15:16:36 +01:00
• 3b93ceaf6e Fixed compression to happen at concatenation to save cpu time -> per-pod5-files are deleted anyways, so storage is not a concern. Tom Kasper 2026-09-19 09:19:23 +01:00
• 15c56b9ffb fixed compression of basecalled data, added reference alignment step Tom Kasper 2026-09-19 08:49:46 +01:00
• 9747494090 fixed hac6 batchsize file path in config Tom Kasper 2026-09-18 09:10:00 +01:00
• 2688d136e3 added benchmarks file to config Tom Kasper 2026-09-18 09:06:03 +01:00
• 0551f008e3 added RTX4060Ti 16GB benchmarks file for HAC v6.0.0 Tom Kasper 2026-09-18 10:05:12 +02:00
• 1511281885 typo fix for all rule, fixed f-string handling in dorado model folder helper Tom Kasper 2026-09-17 22:26:44 +01:00
• 08467102c8 intial version Tom Kasper 2026-09-17 22:16:42 +01:00
• e23ed24fa9 Initial commit Tom 2026-09-17 09:10:36 +02:00