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Re-added trap bascell

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Tom Kasper
2026-10-04 10:41:13 +01:00
parent 673005ceba
commit c734715d3c
1 changed files with 1 additions and 1 deletions
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workflow/Snakefile
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@@ -30,7 +30,7 @@ rule all:
#'../data/basecalled_reads/hac.fastq.gz' #'../data/basecalled_reads/hac.fastq.gz'
#expand('../data/raw_pod5/PBK98658_853a956f_57f83f46_{batch}.pod5',batch=range(1,config["pod5_dataset_size"]+1,config["pod5_stride"])) #expand('../data/raw_pod5/PBK98658_853a956f_57f83f46_{batch}.pod5',batch=range(1,config["pod5_dataset_size"]+1,config["pod5_stride"]))
'../data/aligned_reads/nomiss_hac_to_genome.sorted.bam', '../data/aligned_reads/nomiss_hac_to_genome.sorted.bam',
#'../data/aligned_reads/trap_hac_to_genome.sorted.bam' '../data/aligned_reads/trap_hac_to_genome.sorted.bam'
#'../data/ml_inputs/hac_label_store.pq' #'../data/ml_inputs/hac_label_store.pq'
#'../data/ml_inputs/model_layouts/cnn_512_4_100000_11_4.json' #'../data/ml_inputs/model_layouts/cnn_512_4_100000_11_4.json'